KwaZulu-Natal Health MEC Dr Sbongiseni Dlomo says operations have returned to normal in the hospitals that were affected by Tuesday's storm.
At some of the health institutions, roofs were blown off and patients had to be moved into corridors from wards.
Medical equipment was also damaged.
Dlomo says they still have challenges at Prince Mshiyeni Memorial at Umlazi and King Edward Hospital in Durban where theatres were flooded.
He says other hospital have offered assistance in the meantime.